STRINGSTRING
Slin_0716 protein (Spirosoma linguale) - STRING interaction network
"Slin_0716" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0716Hypothetical protein (338 aa)    
Predicted Functional Partners:
Slin_0301
Hypothetical protein (448 aa)
   
          0.655
Slin_4535
Hypothetical protein (125 aa)
   
          0.650
Slin_1490
Hypothetical protein (348 aa)
   
          0.626
Slin_2382
Hypothetical protein (498 aa)
   
          0.604
Slin_4534
TonB-dependent receptor (779 aa)
   
          0.588
Slin_5341
Hypothetical protein (300 aa)
   
          0.587
Slin_1902
Hypothetical protein (797 aa)
   
          0.564
Slin_3257
Hypothetical protein (185 aa)
   
          0.554
Slin_2123
Hypothetical protein (1073 aa)
   
          0.533
Slin_3163
Nucleotidyltransferase (356 aa)
   
          0.500
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]