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Slin_0718 protein (Spirosoma linguale) - STRING interaction network
"Slin_0718" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0718Hypothetical protein (303 aa)    
Predicted Functional Partners:
Slin_0717
WecB/TagA/CpsF family glycosyl transferase (276 aa)
              0.722
Slin_4273
Group 1 glycosyl transferase (441 aa)
          0.711
Slin_0719
Group 1 glycosyl transferase (401 aa)
              0.657
fcl
NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (313 aa)
 
          0.524
Slin_2583
Family 2 glycosyl transferase (296 aa)
 
          0.521
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (370 aa)
 
          0.517
Slin_4931
Family 2 glycosyl transferase (244 aa)
 
          0.487
Slin_2592
Family 2 glycosyl transferase (256 aa)
 
          0.485
Slin_5207
Family 2 glycosyl transferase (254 aa)
 
          0.475
Slin_2591
Colanic acid biosynthesis acetyltransferase WcaF (212 aa)
 
          0.471
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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