STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0736Hypothetical protein. (373 aa)    
Predicted Functional Partners:
Slin_0735
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_0067 xylose isomerase domain- containing protein.
       0.634
Slin_0737
PFAM: protein of unknown function DUF1311; KEGG: neu:NE2444 putative periplasmic protein.
       0.487
Slin_0734
PFAM: Ferritin Dps family protein; KEGG: pla:Plav_2302 ferritin Dps family protein; Belongs to the Dps family.
       0.463
Slin_0733
PFAM: natural resistance-associated macrophage protein; KEGG: amc:MADE_01595 putative manganese/divalent cation transport protein (NRAMP family).
       0.454
Slin_0738
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; Hydantoinase/oxoprolinase; KEGG: dal:Dalk_4188 5-oxoprolinase (ATP- hydrolyzing).
       0.431
Slin_0739
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: eum:ECUMN_3028 DNA-bindng transcriptional repressor SrlR.
       0.431
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.