STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0793Hypothetical protein. (420 aa)    
Predicted Functional Partners:
Slin_1353
Hypothetical protein; KEGG: pat:Patl_3492 twin-arginine translocation pathway signal.
 
     0.789
Slin_1374
KEGG: mxa:MXAN_5863 hypothetical protein.
 
     0.775
Slin_5518
Chromosome segregation ATPase-like protein; KEGG: hypothetical protein.
  
     0.775
Slin_1217
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: mxa:MXAN_6612 hypothetical protein.
  
     0.772
Slin_4278
KEGG: afw:Anae109_4421 hypothetical protein.
  
     0.772
Slin_5521
SMART: Tetratricopeptide repeat; KEGG: hypothetical protein.
  
     0.769
Slin_0794
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_4173 putative ABC transporter, permease protein.
       0.573
Slin_5340
PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein.
  
     0.551
Slin_3042
PFAM: PglZ domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: rfr:Rfer_2741 two component, sigma54 specific, fis family transcriptional regulator.
  
     0.546
Slin_0030
PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein.
  
     0.541
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.