STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0804KEGG: spe:Spro_0245 protein tyrosine/serine phosphatase. (275 aa)    
Predicted Functional Partners:
Slin_5030
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: pap:PSPA7_2183 phosphotyrosine protein phosphatase.
     
 0.914
Slin_4908
KEGG: rpc:RPC_2416 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
    
 
 0.901
Slin_5945
TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: AGAP012727-PA.
    
 
 0.901
Slin_6421
PFAM: PHP domain protein; KEGG: sun:SUN_1558 capsular polysaccharide biosynthesis protein.
     
  0.900
Slin_5026
PFAM: sulphate transporter; Xanthine/uracil/vitamin C permease; KEGG: nmu:Nmul_A0710 sulphate transporter.
   
 
 0.896
Slin_4267
SMART: LamG domain protein jellyroll fold domain protein; KEGG: gur:Gura_1112 LamG domain-containing protein.
   
 
 0.892
Slin_4268
Hypothetical protein; KEGG: gur:Gura_1112 LamG domain-containing protein.
   
 
 0.892
Slin_3269
PFAM: ferredoxin; KEGG: ferredoxin.
    
 
 0.832
Slin_5128
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; Oxidoreductase FAD-binding domain protein; KEGG: sde:Sde_2886 putative phenylacetic acid degradation NADH oxidoreductase.
    
 
 0.832
Slin_5188
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; Oxidoreductase FAD-binding domain protein; Ferric reductase NAD binding; KEGG: azo:azo0308 phenylacetic acid degradation NADH oxidoreductase PaaE.
    
 
 0.832
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.