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Slin_0806 protein (Spirosoma linguale) - STRING interaction network
"Slin_0806" - PpiC-type peptidyl-prolyl cis-trans isomerase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0806PpiC-type peptidyl-prolyl cis-trans isomerase (458 aa)    
Predicted Functional Partners:
Slin_0807
PpiC-type peptidyl-prolyl cis-trans isomerase (797 aa)
 
       
0.776
Slin_4434
Outer membrane protein assembly complex, YaeT protein (865 aa)
 
 
  0.766
Slin_1528
Hypothetical protein (984 aa)
   
          0.737
Slin_0992
Surface antigen (D15) (875 aa)
   
          0.718
Slin_0805
ATPase AAA (320 aa)
              0.679
Slin_4394
Carboxyl-terminal protease (575 aa)
 
   
  0.669
Slin_3923
Carboxyl-terminal protease (557 aa)
 
   
  0.655
Slin_5634
Hypothetical protein (231 aa)
   
          0.641
Slin_0989
Hypothetical protein (188 aa)
   
          0.635
Slin_4903
Organic solvent tolerance protein OstA-like protein (1210 aa)
   
          0.616
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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