Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Slin_0806PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: gur:Gura_2908 PpiC-type peptidyl-prolyl cis- trans isomerase. (458 aa)    
Predicted Functional Partners:
Slin_4434
TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: dat:HRM2_22410 outer membrane protein (putative surface antigen).
 
 
 0.770
Slin_1307
TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: scl:sce3596 hypothetical protein.
  
 
 0.766
Slin_5634
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: dds:Ddes_0388 tol-pal system protein YbgF.
 
   0.707
Slin_0807
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pfo:Pfl01_5133 PpiC-type peptidyl-prolyl cis- trans isomerase.
 
    
0.698
Slin_1528
KEGG: gsu:GSU1489 hypothetical protein.
  
     0.698
Slin_1309
KEGG: nha:Nham_0177 OstA-like protein.
 
  
 0.662
yidC
Membrane protein insertase, YidC/Oxa1 family; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
  
 0.654
Slin_0992
PFAM: surface antigen (D15); KEGG: hch:HCH_05243 outer membrane protein/protective antigen OMA87.
 
 
 0.652
Slin_0245
TIGRFAM: signal peptidase I; PFAM: Peptidase S24, S26A and S26B, conserved region; KEGG: glo:Glov_1621 signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.599
Slin_0008
KEGG: bba:Bd1501 hypothetical protein.
  
    0.572
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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