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Slin_0807 protein (Spirosoma linguale) - STRING interaction network
"Slin_0807" - PpiC-type peptidyl-prolyl cis-trans isomerase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0807PpiC-type peptidyl-prolyl cis-trans isomerase (797 aa)    
Predicted Functional Partners:
Slin_0806
PpiC-type peptidyl-prolyl cis-trans isomerase (458 aa)
 
       
0.776
Slin_5949
Hypothetical protein (1152 aa)
   
          0.758
Slin_5163
Transcriptional regulator (774 aa)
   
          0.724
Slin_1629
Hypothetical protein (354 aa)
   
          0.703
Slin_5644
Geranylgeranylglyceryl phosphate synthase (249 aa)
   
          0.685
Slin_3456
Peptidase S8/S53 subtilisin kexin sedolisin (515 aa)
 
 
 
  0.678
Slin_5231
Hypothetical protein (343 aa)
   
          0.667
Slin_4080
Family 2 glycosyl transferase (401 aa)
   
          0.663
Slin_1650
Peptidase S8/S53 subtilisin kexin sedolisin (557 aa)
 
 
 
  0.655
Slin_0566
Hypothetical protein (1086 aa)
   
          0.645
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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