STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0971KEGG: ccs:CCNA_01036 hypothetical protein. (932 aa)    
Predicted Functional Partners:
Slin_3267
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; WD40 domain protein beta Propeller; KEGG: swd:Swoo_4518 peptidase S9 prolyl oligopeptidase.
  
     0.728
Slin_0518
Glutamate carboxypeptidase II; PFAM: protease-associated PA domain protein; peptidase M28; KEGG: hypothetical protein.
  
     0.613
Slin_3992
Hypothetical protein.
  
     0.609
Slin_0970
PFAM: oxidoreductase domain protein; KEGG: rlt:Rleg2_4779 oxidoreductase domain protein.
 
 
   0.512
Slin_1514
Hypothetical protein; KEGG: oca:OCAR_5944 BNR/Asp-box repeat domain protein.
  
     0.510
Slin_0766
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sbn:Sbal195_1394 peptidase S9 prolyl oligopeptidase.
  
     0.485
Slin_3122
Hypothetical protein; KEGG: cti:RALTA_B0326 conserved hypothetical protein, BNR repeats; putative outer membrane protein.
  
     0.455
Slin_3346
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pzu:PHZ_c0939 peptidase.
 
     0.453
Slin_3993
PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor.
  
     0.450
Slin_4533
Hypothetical protein; KEGG: pnu:Pnuc_0677 BNR repeat-containing glycosyl hydrolase.
  
     0.435
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.