STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0988Hypothetical protein. (280 aa)    
Predicted Functional Partners:
Slin_0989
Hypothetical protein.
 
    0.784
Slin_2547
Hypothetical protein.
  
     0.706
Slin_0992
PFAM: surface antigen (D15); KEGG: hch:HCH_05243 outer membrane protein/protective antigen OMA87.
 
     0.688
Slin_2040
PFAM: Sporulation domain protein; KEGG: hypothetical protein.
  
     0.639
Slin_5589
Putative phage repressor; PFAM: Peptidase S24, S26A and S26B, conserved region; SMART: helix-turn-helix domain protein; KEGG: sbn:Sbal195_2020 putative phage repressor.
  
     0.638
Slin_5627
Anthranilate phosphoribosyltransferase-like protein; KEGG: similar to phosphoribosylanthranilate transferase.
  
     0.626
Slin_1995
Hypothetical protein; KEGG: ngk:NGK_1616 TonB.
  
     0.624
Slin_0987
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.623
Slin_1841
KEGG: ade:Adeh_0427 outer membrane efflux protein.
  
     0.581
Slin_2311
KEGG: hypothetical protein LOC100169082.
  
     0.577
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.