STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1094PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce5644 carbohydrate ABC transporter. (584 aa)    
Predicted Functional Partners:
Slin_1095
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sfu:Sfum_1390 ABC transporter related.
 
    
0.833
Slin_1093
PFAM: band 7 protein; KEGG: rpi:Rpic_1605 band 7 protein.
 
 
   0.597
Slin_6554
KEGG: gbm:Gbem_1581 hypothetical protein.
  
     0.513
Slin_0317
PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC- type glycine betaine transport system; KEGG: reu:Reut_A1451 binding-protein dependent transport system inner membrane protein.
  
     0.466
Slin_0846
PFAM: metallophosphoesterase; KEGG: bra:BRADO2137 phosphatase.
  
     0.432
Slin_6449
PFAM: protein of unknown function DUF608; KEGG: hypothetical protein.
    
  0.410
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.