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Slin_1109 protein (Spirosoma linguale) - STRING interaction network
"Slin_1109" - Nitrogen-fixing NifU domain-containing protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1109Nitrogen-fixing NifU domain-containing protein (88 aa)    
Predicted Functional Partners:
Slin_1110
ParA/MinD-like ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (367 aa)
   
 
  0.832
Slin_4680
Cysteine desulfurase (372 aa)
   
 
  0.715
Slin_4051
Cysteine desulfurase (380 aa)
   
 
  0.715
Slin_1497
Cysteine desulfurase (389 aa)
   
 
  0.715
Slin_5822
Iron-sulfur cluster assembly accessory protein (108 aa)
   
 
  0.651
Slin_1111
GSCFA domain-containing protein (338 aa)
              0.587
Slin_3885
Hydrogenase maturation protease (158 aa)
 
          0.565
Slin_1108
D-alanine--D-alanine ligase; Cell wall formation (551 aa)
              0.523
Slin_3876
NHL repeat containing protein (379 aa)
 
          0.512
Slin_3886
Nickel-dependent hydrogenase large subunit (531 aa)
 
        0.509
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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