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Slin_1131 protein (Spirosoma linguale) - STRING interaction network
"Slin_1131" - NAD-dependent epimerase/dehydratase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1131NAD-dependent epimerase/dehydratase (315 aa)    
Predicted Functional Partners:
Slin_1584
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (154 aa)
     
        0.736
Slin_0977
Peroxiredoxin (149 aa)
     
        0.736
Slin_5849
Hypothetical protein (282 aa)
     
        0.731
Slin_2462
Family 2 glycosyl transferase (421 aa)
   
          0.681
Slin_1069
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (375 aa)
   
          0.652
Slin_4692
Hypothetical protein (721 aa)
   
          0.651
Slin_6071
Hypothetical protein (303 aa)
     
        0.648
Slin_0847
Hypothetical protein (307 aa)
     
        0.648
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine (364 aa)
     
        0.596
Slin_5407
Nitrite reductase (NAD(P)H) small subunit (117 aa)
   
        0.590
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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