STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1159KEGG: scl:sce0333 hypothetical protein. (144 aa)    
Predicted Functional Partners:
Slin_5875
Hypothetical protein.
  
     0.547
Slin_1160
Hypothetical protein.
       0.531
Slin_3072
PFAM: Anti-sigma-K factor RskA; KEGG: reu:Reut_A0696 transmembrane protein.
  
     0.526
Slin_4879
Hypothetical protein.
  
     0.477
Slin_5680
KEGG: rpe:RPE_4757 protein of unknown function DUF983.
  
     0.446
Slin_1158
PFAM: NLP/P60 protein; CHAP domain containing protein; KEGG: ppr:PBPRA1436 cell wall-associated hydrolase.
       0.408
Slin_1358
KEGG: pca:Pcar_0582 hypothetical protein.
  
     0.406
Slin_1648
Hypothetical protein.
  
     0.406
Slin_2569
Hypothetical protein; KEGG: im:7151086; si:ch211-250g4.3.
  
     0.405
Slin_2829
PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein.
  
     0.401
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.