STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1201PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_7144 ABC transporter, ATP-binding protein. (228 aa)    
Predicted Functional Partners:
Slin_0794
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_4173 putative ABC transporter, permease protein.
   0.974
Slin_4653
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_0108 putative ABC transporter, permease protein.
   0.972
Slin_4639
PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE.
 
 
 0.962
Slin_4615
PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein.
 
 
 0.955
Slin_4628
PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE.
 
 
 0.955
Slin_4617
PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein.
 
 
 0.954
Slin_4595
PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein.
 
 
 0.952
Slin_4591
PFAM: protein of unknown function DUF214; KEGG: cps:CPS_3505 ABC transporter, permease protein.
 
 
 0.950
Slin_4594
PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein.
 
 
 0.950
Slin_4614
PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein.
 
 
 0.950
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.