STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1225Hypothetical protein. (801 aa)    
Predicted Functional Partners:
Slin_1226
Hypothetical protein.
 
     0.935
Slin_1228
Hypothetical protein.
 
     0.885
Slin_1227
PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein.
 
     0.883
Slin_4939
KEGG: hypothetical protein.
  
     0.682
Slin_2828
Hypothetical protein.
 
     0.601
Slin_1223
PFAM: lipolytic protein G-D-S-L family; KEGG: pat:Patl_0828 lipolytic enzyme, G-D-S-L.
       0.576
Slin_1224
KEGG: hypothetical protein.
       0.576
Slin_2915
Hypothetical protein.
 
     0.536
Slin_3341
KEGG: cps:CPS_4697 hypothetical protein.
  
     0.525
Slin_3340
Hypothetical protein.
  
    0.492
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.