STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1341PFAM: putative esterase; KEGG: pat:Patl_2339 putative esterase. (279 aa)    
Predicted Functional Partners:
Slin_1340
PFAM: putative esterase; KEGG: mxa:MXAN_7021 putative esterase.
 
     0.857
Slin_1338
KEGG: scl:sce3586 hypothetical protein.
 
     0.810
Slin_5738
Hypothetical protein.
 
     0.810
Slin_1314
KEGG: scl:sce4393 hypothetical protein.
 
     0.781
Slin_1315
GMP synthase - Glutamine amidotransferase domain- like protein; KEGG: scl:sce3772 hypothetical protein.
 
     0.779
Slin_1342
PFAM: glycoside hydrolase family 16; KEGG: cja:CJA_2759 beta glucanase, putative, glu16F.
       0.661
Slin_1316
Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
     0.611
Slin_4524
Biotin carboxylase-like protein; KEGG: bph:Bphy_7724 putative biotin carboxylase.
  
     0.518
Slin_2144
PFAM: putative esterase; SMART: Tetratricopeptide repeat; KEGG: shn:Shewana3_1514 putative esterase.
 
  
 0.517
Slin_6266
PFAM: putative esterase; KEGG: bpy:Bphyt_5901 putative esterase.
 
     0.501
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.