STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1343KEGG: xca:xccb100_4395 hypothetical protein. (571 aa)    
Predicted Functional Partners:
Slin_6094
Glycogen debranching protein-like protein; KEGG: hypothetical protein.
  
     0.615
Slin_1342
PFAM: glycoside hydrolase family 16; KEGG: cja:CJA_2759 beta glucanase, putative, glu16F.
       0.550
Slin_6132
PFAM: aminotransferase class V; KEGG: bja:blr1280 putative isopenicillin N epimerase.
  
    0.537
Slin_4611
KEGG: afw:Anae109_0103 hypothetical protein.
  
     0.507
Slin_1341
PFAM: putative esterase; KEGG: pat:Patl_2339 putative esterase.
       0.477
Slin_5850
KEGG: sse:Ssed_1732 hypothetical protein.
  
     0.439
Slin_2687
PFAM: glycoside hydrolase family 3 domain protein; KEGG: pin:Ping_0139 glycoside hydrolase family 3 protein.
  
   
 0.424
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.