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Slin_1372 protein (Spirosoma linguale) - STRING interaction network
"Slin_1372" - Glycerophosphoryl diester phosphodiesterase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1372Glycerophosphoryl diester phosphodiesterase (252 aa)    
Predicted Functional Partners:
Slin_1371
Glucose-methanol-choline oxidoreductase (584 aa)
              0.607
Slin_2765
RagB/SusD domain-containing protein (542 aa)
   
          0.599
Slin_1373
3-oxoacyl-ACP reductase (248 aa)
              0.557
Slin_2384
Glycoside hydrolase family protein (330 aa)
   
          0.542
Slin_3370
Hypothetical protein (263 aa)
   
          0.505
Slin_1714
Peptidase M48 Ste24p (708 aa)
   
          0.505
Slin_6617
Oxidoreductase (341 aa)
   
          0.499
Slin_2400
Hypothetical protein (340 aa)
   
          0.484
Slin_4771
Hypothetical protein (268 aa)
   
          0.478
Slin_0813
Hypothetical protein (240 aa)
   
          0.464
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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