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Slin_1383 protein (Spirosoma linguale) - STRING interaction network
"Slin_1383" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1383Hypothetical protein (487 aa)    
Predicted Functional Partners:
Slin_1382
Smr protein/MutS2 (340 aa)
 
          0.882
Slin_0566
Hypothetical protein (1086 aa)
   
          0.741
Slin_2001
Hypothetical protein (500 aa)
   
          0.683
Slin_2799
Thiamine pyrophosphokinase (220 aa)
   
          0.681
Slin_3257
Hypothetical protein (185 aa)
   
          0.680
Slin_5093
Hypothetical protein (590 aa)
   
          0.678
Slin_0659
Hypothetical protein (335 aa)
   
          0.656
Slin_5033
Hypothetical protein (168 aa)
   
          0.644
Slin_5097
Hypothetical protein (727 aa)
   
          0.641
Slin_1217
Hypothetical protein (700 aa)
   
          0.630
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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