STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1383KEGG: gur:Gura_0126 hypothetical protein. (487 aa)    
Predicted Functional Partners:
Slin_1382
PFAM: Smr protein/MutS2; KEGG: nis:NIS_1261 recombination and DNA strand exchange inhibitor protein.
 
     0.836
Slin_4429
Hypothetical protein.
  
     0.705
Slin_5096
Hypothetical protein; KEGG: ypi:YpsIP31758_4008 putative invasin.
  
     0.647
Slin_5097
PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: ppg:PputGB1_0186 hypothetical protein.
  
     0.624
Slin_5732
Hypothetical protein.
  
     0.608
Slin_2001
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: SLEI family protein.
  
     0.564
Slin_0996
Hypothetical protein; KEGG: nis:NIS_1418 glycosyl transferase.
  
     0.560
Slin_5093
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein; KEGG: gme:Gmet_1506 tetratricopeptide TPR_4.
  
     0.556
Slin_5618
KEGG: hypothetical protein.
  
     0.551
Slin_2257
TIGRFAM: conserved repeat domain protein; KEGG: CH211-217K17.8; hypothetical LOC798921.
  
     0.548
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.