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Slin_1388 protein (Spirosoma linguale) - STRING interaction network
"Slin_1388" - Glycosyl transferase family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1388Glycosyl transferase family protein (759 aa)    
Predicted Functional Partners:
Slin_3202
Peptidoglycan glycosyltransferase (654 aa)
 
 
  0.864
Slin_1387
Hypothetical protein (122 aa)
              0.840
Slin_4738
Peptidoglycan glycosyltransferase (709 aa)
 
 
  0.831
Slin_3201
Cell cycle protein (426 aa)
 
 
  0.666
Slin_4751
Cell cycle protein (373 aa)
 
 
  0.612
Slin_5875
Hypothetical protein (134 aa)
   
          0.587
Slin_1208
ECF subfamily RNA polymerase sigma-24 subunit (195 aa)
   
          0.586
Slin_2266
Alanine racemase (835 aa)
 
 
  0.576
Slin_3074
Glycosyl transferase family protein (854 aa)
 
 
0.573
Slin_4761
RagB/SusD domain-containing protein (590 aa)
   
          0.573
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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