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Slin_1402 protein (Spirosoma linguale) - STRING interaction network
"Slin_1402" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1402Hypothetical protein (247 aa)    
Predicted Functional Partners:
Slin_1401
Hypothetical protein (240 aa)
              0.633
Slin_0971
Hypothetical protein (932 aa)
 
          0.629
Slin_3990
Peptidase M14 carboxypeptidase A (942 aa)
 
          0.626
Slin_2424
Beta-lactamase (322 aa)
   
          0.501
Slin_1044
Hypothetical protein (266 aa)
   
          0.497
Slin_1727
Hypothetical protein (145 aa)
   
          0.479
Slin_4581
Hypothetical protein (494 aa)
   
          0.441
Slin_6008
Acriflavin resistance protein (1026 aa)
   
          0.415
Slin_1066
Radical SAM domain-containing protein (387 aa)
   
          0.415
Slin_4164
Alpha/beta hydrolase fold protein (356 aa)
   
          0.408
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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