STRINGSTRING
Slin_1444 protein (Spirosoma linguale) - STRING interaction network
"Slin_1444" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1444Hypothetical protein (65 aa)    
Predicted Functional Partners:
Slin_1445
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (159 aa)
              0.859
Slin_1443
Hypothetical protein (88 aa)
              0.859
Slin_1442
Cytochrome C assembly protein (888 aa)
              0.859
Slin_1441
Hypothetical protein (75 aa)
              0.859
Slin_1446
Hypothetical protein (84 aa)
              0.801
Slin_1447
Cytochrome C assembly protein (221 aa)
              0.607
Slin_1440
Transporter-associated protein (427 aa)
              0.583
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (212 aa)
              0.508
Slin_1448
Cytochrome C biogenesis protein CcmB (224 aa)
              0.452
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (15%) [ZH]