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Slin_1470 protein (Spirosoma linguale) - STRING interaction network
"Slin_1470" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1470Hypothetical protein (419 aa)    
Predicted Functional Partners:
Slin_1019
Glycoside hydrolase family protein (393 aa)
          0.817
Slin_0551
Glycoside hydrolase family protein (397 aa)
          0.813
Slin_4246
alpha-L-rhamnosidase (793 aa)
   
        0.748
Slin_6431
Glycoside hydrolase family protein (325 aa)
 
          0.691
Slin_2880
Hypothetical protein (537 aa)
   
          0.683
Slin_1945
alpha-L-rhamnosidase (819 aa)
   
        0.656
Slin_1469
ABC transporter (586 aa)
   
        0.614
Slin_0456
Glycoside hydrolase family protein (462 aa)
 
        0.545
Slin_2836
Hypothetical protein (469 aa)
 
          0.537
Slin_1806
Glycoside hydrolase family protein (378 aa)
        0.534
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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