STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1503PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: geo:Geob_1528 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. (437 aa)    
Predicted Functional Partners:
Slin_2789
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: glo:Glov_0506 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
 
   
 0.756
Slin_1863
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: hypothetical protein.
 
   
 0.751
Slin_0780
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: hypothetical protein.
 
   
 0.736
Slin_2725
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ypg:YpAngola_A2137 thiol-disulfide oxidoreductase.
  
     0.703
Slin_1502
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vha:VIBHAR_06617 lactoylglutathione lyase.
       0.689
Slin_1504
KEGG: expressed hypothetical protein.
       0.539
Slin_3751
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ypk:y2363 thioredoxin-family protein.
 
   
 0.480
Slin_0777
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: glo:Glov_0530 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
 
   
 0.425
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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