STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1543PFAM: cyclase family protein; KEGG: dol:Dole_1641 cyclase family protein. (255 aa)    
Predicted Functional Partners:
Slin_1544
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbt:BBta_2632 putative fumarylacetoacetate (FAA) hydrolase.
     0.917
Slin_1542
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ppu:PP_3199 hypothetical protein.
 
   
 0.849
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
  
 0.833
Slin_1547
KEGG: bbt:BBta_1933 hypothetical protein; Belongs to the UPF0255 family.
 
     0.688
Slin_1548
Catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr3819 metapyrocatechase.
 
     0.668
Slin_3989
PFAM: Cupin 2 conserved barrel domain protein; KEGG: har:HEAR3310 hypothetical protein.
  
    0.630
Slin_0336
PFAM: monooxygenase FAD-binding; KEGG: bja:bll2502 hypothetical protein.
 
   
 0.520
Slin_4021
Catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr3819 metapyrocatechase.
 
     0.503
Slin_1545
PFAM: XisH protein.
       0.448
Slin_1546
PFAM: XisI protein.
       0.445
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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