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Slin_1543 protein (Spirosoma linguale) - STRING interaction network
"Slin_1543" - Cyclase family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1543Cyclase family protein (255 aa)    
Predicted Functional Partners:
Slin_1542
Monooxygenase FAD-binding protein (374 aa)
 
          0.929
Slin_1544
Fumarylacetoacetate hydrolase (302 aa)
 
          0.736
Slin_1547
Hypothetical protein (384 aa)
 
          0.722
Slin_1545
XisH protein (138 aa)
              0.523
Slin_1546
XisI protein (115 aa)
              0.518
Slin_2116
Monooxygenase FAD-binding protein (384 aa)
 
          0.493
Slin_5193
Cyclase family protein (295 aa)
   
          0.475
Slin_0336
Monooxygenase FAD-binding protein (412 aa)
 
          0.410
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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