STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1548Catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr3819 metapyrocatechase. (330 aa)    
Predicted Functional Partners:
Slin_4021
Catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr3819 metapyrocatechase.
  
  
 
0.922
Slin_1547
KEGG: bbt:BBta_1933 hypothetical protein; Belongs to the UPF0255 family.
 
     0.905
Slin_5718
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:bll1019 hypothetical protein.
     
  0.900
Slin_1549
Hypothetical protein; KEGG: azo:azo2426 putative TRAP-type C4- dicarboxylate transport system, large permease.
       0.773
Slin_4022
PFAM: LmbE family protein; KEGG: ppf:Pput_1362 LmbE family protein.
 
     0.761
Slin_1557
PFAM: amidohydrolase 2; KEGG: dac:Daci_4537 amidohydrolase 2.
 
   
 0.752
Slin_1562
KEGG: rpa:RPA1785 hypothetical protein; Belongs to the UPF0311 family.
 
   
 0.730
Slin_4025
PFAM: protein of unknown function DUF453; KEGG: csa:Csal_0328 methylitaconate delta2-delta3- isomerase.
 
   
 0.683
Slin_4023
PFAM: Dimethylmenaquinone methyltransferase; KEGG: reu:Reut_B5772 dimethylmenaquinone methyltransferase.
 
   
 0.681
Slin_1558
KEGG: smt:Smal_1419 hypothetical protein.
  
     0.670
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.