STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1695KEGG: rpe:RPE_0295 hypothetical protein. (76 aa)    
Predicted Functional Partners:
Slin_1329
PFAM: Protein of unknown function DUF2442; KEGG: gur:Gura_3956 hypothetical protein.
 
     0.785
Slin_1092
KEGG: maq:Maqu_2522 hypothetical protein.
  
     0.775
Slin_6036
KEGG: gur:Gura_3957 hypothetical protein.
  
     0.775
Slin_1693
Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
       0.773
Slin_1694
Hypothetical protein.
       0.773
Slin_1696
KEGG: afw:Anae109_1644 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase.
       0.746
Slin_1697
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
       0.538
Slin_0045
Hypothetical protein; KEGG: scl:sce8068 putative transposase.
  
     0.525
Slin_1698
PFAM: oxidoreductase domain protein; KEGG: tbd:Tbd_2258 putative glucose-fructose oxidoreductase oxidoreductase protein.
       0.465
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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