STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1736Hypothetical protein. (151 aa)    
Predicted Functional Partners:
Slin_6326
Hypothetical protein.
  
     0.731
Slin_1752
KEGG: hypothetical protein.
  
     0.651
Slin_0285
KEGG: avn:Avin_18240 hypothetical protein.
  
     0.638
Slin_5550
Hypothetical protein.
  
     0.635
Slin_0230
Hypothetical protein; KEGG: geo:Geob_3131 fibronectin type III domain protein.
  
     0.608
Slin_0229
Hypothetical protein; KEGG: geo:Geob_3131 fibronectin type III domain protein.
  
     0.607
Slin_0445
Hypothetical protein.
  
     0.605
Slin_3020
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_5184 sensor histidine kinase.
  
     0.605
Slin_4551
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rsh:Rsph17029_3152 antibiotic biosynthesis monooxygenase.
  
     0.601
Slin_6106
Hypothetical protein.
  
     0.599
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.