STRINGSTRING
Slin_1772 protein (Spirosoma linguale) - STRING interaction network
"Slin_1772" - Amidohydrolase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1772Amidohydrolase (433 aa)    
Predicted Functional Partners:
Slin_1771
Amidohydrolase (1020 aa)
       
0.951
Slin_4770
Phosphoglycerate mutase (168 aa)
   
          0.687
Slin_2535
Peptidase M14 carboxypeptidase A (860 aa)
   
          0.650
Slin_4490
Hypothetical protein (843 aa)
   
          0.642
Slin_2851
Peptidase S9 prolyl oligopeptidase active site domain-containing protein (811 aa)
 
          0.632
Slin_2367
Peptidase M14, carboxypeptidase A (580 aa)
   
          0.630
Slin_1770
Hypothetical protein (248 aa)
              0.546
Slin_2688
Hypothetical protein (415 aa)
   
          0.544
Slin_3235
Hypothetical protein (154 aa)
   
          0.523
Slin_5214
Peptidase M28 (531 aa)
   
        0.502
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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