STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1772Amidohydrolase; KEGG: ilo:IL1716 amidohydrolase. (433 aa)    
Predicted Functional Partners:
Slin_1771
PFAM: amidohydrolase; KEGG: she:Shewmr4_1350 amidohydrolase.
    
0.958
Slin_6557
KEGG: hypothetical protein.
  
  
 0.633
Slin_2851
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; WD40 domain protein beta Propeller; KEGG: xcc:XCC4016 dipeptidyl-peptidase.
 
     0.583
Slin_2535
PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: sml:Smlt0603 putative peptidase M14, carboxypeptidase A precursor.
  
     0.577
Slin_5659
KEGG: hypothetical protein.
  
     0.491
Slin_1770
Hypothetical protein.
       0.471
Slin_4490
KEGG: pat:Patl_1102 hypothetical protein.
  
     0.455
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.