STRINGSTRING
Slin_1779 protein (Spirosoma linguale) - STRING interaction network
"Slin_1779" - Peptidase M23 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1779Peptidase M23 (354 aa)    
Predicted Functional Partners:
Slin_4394
Carboxyl-terminal protease (575 aa)
 
 
  0.714
Slin_3923
Carboxyl-terminal protease (557 aa)
 
 
  0.691
Slin_1780
Thioredoxin reductase (323 aa)
         
  0.654
Slin_1778
Hypothetical protein (199 aa)
              0.574
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Cell wall formation (222 aa)
   
 
  0.558
Slin_6521
Carboxyl-terminal protease (709 aa)
   
 
  0.514
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (258 aa)
 
     
  0.510
Slin_3220
Glycosyl transferase family protein (785 aa)
 
 
 
  0.503
Slin_3074
Glycosyl transferase family protein (854 aa)
 
 
 
  0.495
Slin_1618
Aminodeoxychorismate lyase (345 aa)
 
      0.489
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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