STRINGSTRING
Slin_1845 protein (Spirosoma linguale) - STRING interaction network
"Slin_1845" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1845Hypothetical protein (98 aa)    
Predicted Functional Partners:
Slin_1846
Hypothetical protein (390 aa)
              0.796
Slin_0450
Hypothetical protein (121 aa)
   
          0.608
Slin_4583
acyl-ACP desaturase (325 aa)
   
          0.585
Slin_1847
Hypothetical protein (65 aa)
              0.577
Slin_1844
Sodium/hydrogen exchanger (410 aa)
              0.558
Slin_2496
Hypothetical protein (371 aa)
   
          0.532
Slin_4312
LysR family transcriptional regulator (307 aa)
   
          0.509
Slin_5875
Hypothetical protein (134 aa)
   
          0.443
Slin_3994
TetR family transcriptional regulator (238 aa)
   
          0.437
Slin_4181
Hypothetical protein (1750 aa)
   
          0.429
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (13%) [HD]