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Slin_1849 protein (Spirosoma linguale) - STRING interaction network
"Slin_1849" - Transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1849Transcriptional regulator (228 aa)    
Predicted Functional Partners:
Slin_1850
Histidine kinase (458 aa)
 
  0.988
Slin_4794
Histidine kinase (454 aa)
 
  0.920
Slin_2945
Histidine kinase (451 aa)
 
  0.920
Slin_0920
Histidine kinase (481 aa)
 
  0.920
Slin_0731
Histidine kinase (455 aa)
 
  0.920
Slin_2930
Histidine kinase (468 aa)
 
  0.920
Slin_4055
Histidine kinase (455 aa)
 
  0.919
Slin_2618
Histidine kinase (462 aa)
 
 
  0.883
Slin_0512
Histidine kinase (303 aa)
 
  0.847
Slin_5610
Histidine kinase (344 aa)
 
  0.833
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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