STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1863PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: hypothetical protein. (409 aa)    
Predicted Functional Partners:
Slin_1503
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: geo:Geob_1528 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
 
   
 0.751
Slin_2725
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ypg:YpAngola_A2137 thiol-disulfide oxidoreductase.
 
   
 0.610
Slin_0646
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mxa:MXAN_1564 alkyl hydroperoxide reductase C.
  
 0.531
Slin_0701
Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; Redoxin domain protein; KEGG: rpi:Rpic_0704 peroxidase.
  
 0.531
Slin_1864
PFAM: protein of unknown function DUF323; KEGG: dal:Dalk_3476 protein of unknown function DUF323.
       0.520
Slin_0249
Hypothetical protein; KEGG: scl:sce6762 putative secreted protein.
  
 
   0.512
Slin_5677
PFAM: electron transport protein SCO1/SenC; KEGG: afw:Anae109_2865 electron transport protein SCO1/SenC.
  
 
 0.511
Slin_6359
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.510
Slin_4066
PFAM: Thioredoxin domain; KEGG: AGAP012940-PA.
  
 
 0.500
Slin_4973
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: cff:CFF8240_1087 thiol:disulfide interchange protein DsbD.
  
 
 0.500
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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