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Slin_1926 protein (Spirosoma linguale) - STRING interaction network
"Slin_1926" - Glycerate kinase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1926Glycerate kinase (371 aa)    
Predicted Functional Partners:
Slin_4694
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (318 aa)
   
 
  0.944
Slin_3069
Aldehyde dehydrogenase (508 aa)
       
  0.910
Slin_1742
Aldehyde dehydrogenase (476 aa)
       
  0.910
Slin_1074
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (634 aa)
         
  0.905
Slin_0324
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (311 aa)
         
  0.905
Slin_2908
Phosphoglycerate mutase (219 aa)
       
    0.900
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (525 aa)
         
    0.900
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (144 aa)
 
        0.746
Slin_1929
Hypothetical protein (149 aa)
              0.684
Slin_1928
Hypothetical protein (206 aa)
              0.684
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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