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Slin_1950 protein (Spirosoma linguale) - STRING interaction network
"Slin_1950" - Peptidase S15 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1950Peptidase S15 (372 aa)    
Predicted Functional Partners:
Slin_2181
Hypothetical protein (184 aa)
 
          0.854
Slin_1951
Cupin (131 aa)
 
          0.772
Slin_1952
Acetyltransferase (191 aa)
 
          0.723
Slin_1948
Cupin (161 aa)
 
          0.668
Slin_2756
Hypothetical protein (374 aa)
 
          0.522
Slin_2195
Cupin (189 aa)
 
          0.495
Slin_1949
AraC family transcriptional regulator (289 aa)
              0.462
Slin_4145
Carboxylesterase (542 aa)
     
    0.446
Slin_4016
Carboxylesterase type B (551 aa)
     
    0.446
Slin_2185
Carboxylesterase type B (553 aa)
     
    0.446
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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