STRINGSTRING
Slin_2005 protein (Spirosoma linguale) - STRING interaction network
"Slin_2005" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2005Hypothetical protein (192 aa)    
Predicted Functional Partners:
Slin_2006
Hypothetical protein (109 aa)
              0.655
Slin_3666
Cyclase/dehydrase (284 aa)
 
          0.645
Slin_2004
Hypothetical protein (127 aa)
              0.621
Slin_2003
RES domain-containing protein (149 aa)
 
          0.620
Slin_4131
Hypothetical protein (165 aa)
   
          0.605
Slin_3244
Hypothetical protein (113 aa)
   
          0.564
Slin_5261
Glycoside hydrolase family protein (453 aa)
   
          0.527
Slin_5260
Glycosyltransferase (405 aa)
   
          0.514
Slin_1035
GAF sensor hybrid histidine kinase (1201 aa)
   
        0.506
Slin_5183
NAD-dependent epimerase/dehydratase (357 aa)
   
          0.506
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (16%) [HD]