Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Slin_2007HPr kinase; KEGG: xac:XAC0062 hypothetical protein. (301 aa)    
Predicted Functional Partners:
Slin_0571
KEGG: pin:Ping_2660 hypothetical protein.
 
     0.797
Slin_0569
KEGG: sun:SUN_1515 hypothetical protein.
 
     0.773
Slin_6404
PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3848 hypothetical protein.
  
     0.544
Slin_0568
PFAM: asparagine synthase; KEGG: mlo:mll5256 asparagine synthetase.
 
   
 0.542
Slin_2006
Hypothetical protein.
       0.539
Slin_2543
Membrane protein-like protein; KEGG: dal:Dalk_2331 hypothetical protein.
  
     0.527
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
  
 0.517
Slin_1558
KEGG: smt:Smal_1419 hypothetical protein.
  
     0.455
Slin_1548
Catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr3819 metapyrocatechase.
  
   
 0.435
Slin_2248
KEGG: hypothetical protein.
  
     0.427
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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