STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2018Hypothetical protein. (686 aa)    
Predicted Functional Partners:
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
       0.812
Slin_4489
Hypothetical protein.
 
     0.773
Slin_6184
Hypothetical protein.
  
     0.773
Slin_6106
Hypothetical protein.
  
     0.772
Slin_0996
Hypothetical protein; KEGG: nis:NIS_1418 glycosyl transferase.
  
     0.770
Slin_2013
KEGG: tgr:Tgr7_2227 hypothetical protein.
 
  
 0.770
Slin_0992
PFAM: surface antigen (D15); KEGG: hch:HCH_05243 outer membrane protein/protective antigen OMA87.
  
     0.769
Slin_5550
Hypothetical protein.
  
     0.769
Slin_4892
KEGG: ubiquitin-protein ligase 1; K10592 E3 ubiquitin-protein ligase HUWE1.
  
     0.768
Slin_2995
Hypothetical protein.
  
     0.767
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.