STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2039Hypothetical protein. (558 aa)    
Predicted Functional Partners:
Slin_2038
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein; KEGG: hypothetical protein.
 
     0.903
Slin_1995
Hypothetical protein; KEGG: ngk:NGK_1616 TonB.
 
 
 0.814
Slin_5837
PFAM: 4'-phosphopantetheinyl transferase; KEGG: aha:AHA_1313 4'- phosphopantetheinyltransferase family protein; Belongs to the P-Pant transferase superfamily.
  
     0.756
Slin_2040
PFAM: Sporulation domain protein; KEGG: hypothetical protein.
       0.754
Slin_1309
KEGG: nha:Nham_0177 OstA-like protein.
  
   
 0.749
Slin_2668
SMART: Tetratricopeptide repeat; KEGG: mxa:MXAN_5661 putative BatC protein.
  
     0.742
Slin_5618
KEGG: hypothetical protein.
 
 
 0.741
Slin_1743
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: GF25073 gene product from transcript GF25073- RA.
  
     0.738
Slin_5161
KEGG: bpm:BURPS1710b_1566 hypothetical protein.
  
     0.736
Slin_2547
Hypothetical protein.
  
     0.735
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.