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Slin_2042 protein (Spirosoma linguale) - STRING interaction network
"Slin_2042" - acetate/CoA ligase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2042acetate/CoA ligase (636 aa)    
Predicted Functional Partners:
Slin_2043
AMP-dependent synthetase and ligase (638 aa)
 
   
 
0.973
Slin_2911
Malate dehydrogenase (755 aa)
   
  0.959
Slin_4408
Aldehyde dehydrogenase (457 aa)
   
  0.956
Slin_3069
Aldehyde dehydrogenase (508 aa)
   
  0.956
Slin_2333
Aldehyde dehydrogenase (504 aa)
   
  0.956
Slin_1742
Aldehyde dehydrogenase (476 aa)
   
  0.956
Slin_0798
Aldehyde dehydrogenase (540 aa)
   
  0.956
Slin_6109
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein (718 aa)
 
  0.938
Slin_6110
acetyl-CoA acetyltransferase (402 aa)
   
 
  0.935
Slin_2669
acetyl-CoA acetyltransferase (391 aa)
   
 
  0.935
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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