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Slin_2174 protein (Spirosoma linguale) - STRING interaction network
"Slin_2174" - GAF sensor signal transduction histidine kinase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2174GAF sensor signal transduction histidine kinase (413 aa)    
Predicted Functional Partners:
Slin_2656
Histidine kinase (246 aa)
 
          0.741
Slin_1029
Response regulator receiver sensor signal transduction histidine kinase (371 aa)
 
          0.741
Slin_5440
GAF sensor signal transduction histidine kinase (407 aa)
 
          0.736
Slin_2761
PAS/PAC sensor signal transduction histidine kinase (679 aa)
   
          0.703
Slin_1041
Multi-sensor signal transduction histidine kinase (1406 aa)
   
          0.678
Slin_1270
PAS/PAC sensor signal transduction histidine kinase (405 aa)
   
          0.674
Slin_3554
PAS/PAC sensor signal transduction histidine kinase (541 aa)
   
          0.670
Slin_3829
PAS/PAC sensor signal transduction histidine kinase (475 aa)
   
          0.669
Slin_5220
Histidine kinase (438 aa)
   
          0.667
Slin_0190
Histidine kinase (472 aa)
   
          0.666
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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