STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2184PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: pst:PSPTO_2863 aldehyde oxidase and xanthine dehydrogenase family protein. (736 aa)    
Predicted Functional Partners:
Slin_2182
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sml:Smlt2505 putative xanthine dehydrogenase YagT iron-sulfur binding subunit.
 
 0.994
Slin_2371
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mrd:Mrad2831_4484 2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 0.985
Slin_2189
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mrd:Mrad2831_4484 2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 0.984
Slin_0111
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mlo:mlr1925 oxidoreductase, iron-sulphur binding subunit.
 
 0.983
Slin_2183
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: azc:AZC_1401 putative oxidoreductase.
 
 0.974
Slin_1103
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: scl:sce3337 [2Fe-2S]-binding protein.
 
 
 0.942
Slin_5426
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: pat:Patl_2511 (2Fe-2S)-binding.
 
 
 0.942
Slin_6243
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rpb:RPB_2280 (2Fe-2S)-binding protein.
 
 
 0.942
Slin_2370
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mno:Mnod_2923 molybdopterin dehydrogenase FAD- binding.
 
 0.934
Slin_2190
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mrd:Mrad2831_4485 molybdopterin dehydrogenase FAD-binding.
 
 0.905
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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