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Slin_2238 protein (Spirosoma linguale) - STRING interaction network
"Slin_2238" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2238Family 2 glycosyl transferase (374 aa)    
Predicted Functional Partners:
Slin_2239
Hypothetical protein (333 aa)
 
          0.954
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (182 aa)
              0.750
Slin_2236
Family 2 glycosyl transferase (343 aa)
 
       
0.719
Slin_2237
Polysaccharide deacetylase (215 aa)
 
          0.704
Slin_5852
Hypothetical protein (623 aa)
   
          0.702
Slin_5644
Geranylgeranylglyceryl phosphate synthase (249 aa)
   
          0.664
Slin_3862
Family 2 glycosyl transferase (403 aa)
   
          0.626
Slin_0248
O-methyltransferase-like protein (259 aa)
   
          0.595
Slin_4093
Family 2 glycosyl transferase (296 aa)
   
          0.574
Slin_2461
Family 2 glycosyl transferase (289 aa)
   
          0.573
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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