STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2289KEGG: hsm:HSM_1351 hypothetical protein. (130 aa)    
Predicted Functional Partners:
Slin_1376
PFAM: HRDC domain protein; SMART: HRDC domain protein; AAA ATPase; KEGG: dat:HRM2_02150 helicase-family protein.
 
     0.523
Slin_5189
N-acetylglucosamine kinase-like protein; KEGG: bph:Bphy_2984 ATPase BadF/BadG/BcrA/BcrD type.
 
     0.420
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: dal:Dalk_1023 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
  
 0.406
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.