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Slin_2434 protein (Spirosoma linguale) - STRING interaction network
"Slin_2434" - Class V aminotransferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2434Class V aminotransferase (338 aa)    
Predicted Functional Partners:
Slin_0324
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (311 aa)
 
 
  0.968
Slin_1074
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (634 aa)
   
 
  0.941
Slin_5522
Threonine synthase (435 aa)
   
    0.920
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (682 aa)
     
      0.849
Slin_1073
Class V aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (363 aa)
   
   
 
0.835
Slin_1817
FMN-dependent alpha-hydroxy acid dehydrogenase (349 aa)
     
 
  0.737
Slin_0229
Hypothetical protein (963 aa)
   
          0.728
Slin_0230
Hypothetical protein (969 aa)
   
          0.727
Slin_5122
Hypothetical protein (1005 aa)
   
          0.716
Slin_2797
Hypothetical protein (1343 aa)
   
          0.691
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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