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Slin_2448 protein (Spirosoma linguale) - STRING interaction network
"Slin_2448" - Short-chain dehydrogenase/reductase SDR in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2448Short-chain dehydrogenase/reductase SDR (257 aa)    
Predicted Functional Partners:
Slin_1007
Short-chain dehydrogenase/reductase SDR (233 aa)
 
 
  0.633
Slin_4802
Short-chain dehydrogenase/reductase SDR (267 aa)
   
          0.584
Slin_2447
phytanoyl-CoA dioxygenase (271 aa)
              0.582
Slin_2449
DEAD/DEAH box helicase (485 aa)
   
      0.506
Slin_3808
Short-chain dehydrogenase/reductase SDR (248 aa)
 
 
  0.439
Slin_0208
Short-chain dehydrogenase/reductase SDR (263 aa)
 
 
0.418
Slin_1686
Short-chain dehydrogenase/reductase SDR (269 aa)
 
 
0.416
Slin_3645
Short-chain dehydrogenase/reductase SDR (268 aa)
 
 
0.414
Slin_2520
Short-chain dehydrogenase/reductase SDR (271 aa)
 
 
  0.411
Slin_1508
Short-chain dehydrogenase/reductase SDR (294 aa)
 
 
  0.408
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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