STRINGSTRING
Slin_2455 protein (Spirosoma linguale) - STRING interaction network
"Slin_2455" - Heparinase II/III family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2455Heparinase II/III family protein (628 aa)    
Predicted Functional Partners:
Slin_2456
G-D-S-L family lipolytic protein (219 aa)
              0.728
Slin_0440
RagB/SusD domain-containing protein (561 aa)
   
          0.575
Slin_2229
Acetyl xylan esterase (441 aa)
   
          0.555
Slin_2416
Na+/solute symporter (575 aa)
   
          0.543
Slin_2420
Hypothetical protein (764 aa)
   
          0.513
Slin_3977
G-D-S-L family lipolytic protein (593 aa)
   
          0.482
Slin_2501
Hypothetical protein (329 aa)
   
          0.469
Slin_4377
Lipase (238 aa)
   
          0.456
Slin_1257
Glycoside hydrolase family protein (1347 aa)
   
          0.454
Slin_1223
G-D-S-L family lipolytic protein (316 aa)
   
          0.448
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]