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Slin_2464 protein (Spirosoma linguale) - STRING interaction network
"Slin_2464" - ABC transporter in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2464ABC transporter (286 aa)    
Predicted Functional Partners:
Slin_2463
ABC transporter (431 aa)
 
  0.996
Slin_2571
ABC transporter (419 aa)
 
  0.981
Slin_2461
Family 2 glycosyl transferase (289 aa)
   
   
  0.885
Slin_2462
Family 2 glycosyl transferase (421 aa)
 
          0.864
Slin_2570
ABC transporter (279 aa)
   
   
 
0.843
Slin_2465
Family 2 glycosyl transferase (350 aa)
 
   
  0.790
Slin_4813
dTDP-4-dehydrorhamnose 3,5-epimerase (173 aa)
 
   
  0.643
Slin_2582
Group 1 glycosyl transferase (369 aa)
 
   
  0.613
Slin_6507
Group 1 glycosyl transferase (356 aa)
 
   
  0.590
Slin_4074
Group 1 glycosyl transferase (339 aa)
 
   
  0.571
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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