STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2495Hypothetical protein; KEGG: sfr:Sfri_2482 lysine exporter protein (LysE/YggA). (204 aa)    
Predicted Functional Partners:
Slin_2496
KEGG: vvy:VV0791 hypothetical protein.
 
     0.881
Slin_2497
KEGG: vvy:VV0793 hypothetical protein.
 
    0.824
Slin_2498
Hypothetical protein.
       0.563
Slin_2814
KEGG: afw:Anae109_3731 hypothetical protein.
  
     0.551
Slin_2494
PFAM: alpha/beta hydrolase fold; KEGG: rec:RHECIAT_CH0003785 probable esterase/hydrolase protein.
       0.518
Slin_3510
KEGG: mch:Mchl_0136 hypothetical protein.
  
     0.514
Slin_2437
KEGG: mxa:MXAN_2499 hypothetical protein.
  
     0.500
Slin_0372
PFAM: major facilitator superfamily MFS_1; KEGG: abc:ACICU_00599 major facilitator superfamily permease.
  
     0.451
Slin_2514
KEGG: rec:RHECIAT_CH0000673 hypothetical protein.
 
     0.436
Slin_1640
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mxa:MXAN_6190 solute/sodium symporter (SSS) family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
   
 0.426
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.