STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2513KEGG: vcj:VCD_000675 hypothetical protein. (158 aa)    
Predicted Functional Partners:
Slin_2514
KEGG: rec:RHECIAT_CH0000673 hypothetical protein.
 
     0.889
Slin_2509
KEGG: aeh:Mlg_0236 hypothetical protein.
 
     0.718
Slin_2497
KEGG: vvy:VV0793 hypothetical protein.
 
     0.697
Slin_2496
KEGG: vvy:VV0791 hypothetical protein.
 
     0.642
Slin_2526
PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ferric reductase domain protein transmembrane component domain; KEGG: msl:Msil_3755 Rieske (2Fe-2S) domain protein.
 
 
   0.631
Slin_2517
PFAM: YHS domain protein; KEGG: sde:Sde_3840 hypothetical protein.
 
    
0.513
Slin_2515
PFAM: glucose-methanol-choline oxidoreductase; KEGG: mrd:Mrad2831_2394 glucose-methanol-choline oxidoreductase.
       0.427
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.